OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages
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⚡High Performance DICOM Medical Image Parser in Go.
MagicScaler high-performance, high-quality image processing pipeline for .NET
An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.
cell detection in calcium imaging recordings
HDR Toolbox for processing High Dynamic Range (HDR) images into MATLAB and Octave
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
Automated 3D cell detection in very large images
Deep and Machine Learning for Microscopy
Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.
Object Pascal image loading, saving and manipulation library.
Noise Correction Algorithm for sCMOS cameras
A python package to analyze the matrix fiber orientation and intensity around cells in fiber matrices (as a proxy for cellular forces).