C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
- variant-calling
- genomics
- vcf-manipulation
- genotyping
47,133 repositories indexed
97–120 of 164 · Most stars
C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
C++ library for writing multiplatform terminal applications
:spider_web: A Python interface to CGAL's meshing tools
HARFANG 3D source code public repository
Multi-Modal Database replacing MongoDB, Neo4J, and Elastic with 1 faster ACID solution, with NetworkX and Pandas interfaces, and bindings for C 99, C++ 17, Python 3, Java, GoLang 🗄️
The Point Processing Toolkit (pptk) is a Python package for visualizing and processing 2-d/3-d point clouds.
CodeCompass is a software comprehension tool for large scale software written in C/C++, C# and Python.
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
2D/3D simplicial mesh generator interface for Python (Triangle, TetGen, gmsh)
The ultimate Python binding for Vulkan API
ESP8266 based mesh. This is a mirror copy of https://gitlab.com/painlessMesh/painlessMesh PLEASE ADD COMMENTS, ISSUES and PULL REQUESTS ON GITLAB so that all information is centralized.
Fast In-Memory Data Compression Algorithm (header-only C/C++) 540+MB/s compress, 3000+MB/s decompress, ratio% better than LZ4, Snappy, and Zstd@--1
A Python platform to perform parallel computations of optimisation tasks (global and local) via the asynchronous generalized island model.
Boost.org python module
TTK - Topological Data Analysis and Visualization - Source Code
The fastest automatic differentiation library for C++, with Python bindings. Forward, adjoint and higher-order derivatives, checkpointing, Eigen support and JIT. Reproducible benchmarks against CppAD, Adept and autodiff.
Binary Editor for Qt
PyKEP is a scientific library providing basic tools for research in interplanetary trajectory design.
Universal cheminformatics toolkit, utilities and database search tools
An experimental embedded SQL engine in C++20. Query Parquet, CSV, JSON, Arrow, Avro, SQLite, and Excel files directly with SQL, in-process. Early-stage.
Unofficial native Windows port of BLACK (Xbox, NTSC-U). Runs your own copy of the game's code on the PC; no game data included.
Behavior Trees Library for ROS (Robot Operating System). In C++ and python
Simple C++ ini parser.
A compiler from Doxygen XML to reStructuredText -- hence, the name. It parses XML databases generated by Doxygen and produces reStructuredText for the Python documentation generator Sphinx.