Repository Index

An interactive Quiz generator for Jupyter notebooks and Jupyter Book

• quiz
• jupyter-notebook
• jupyter-notebooks
• interactive

🏃 The go-to single-cell Foundation Model

• batch-correction
• cell-biology
• celltype-annotation
• denoising

Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.

• disentanglement
• drug-discovery
• genomics
• perturbation

General Modeling Network Specification

• network
• specification
• highway-network
• road-network

GeneCompass

PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.

Generate random crop fields for Ignition Gazebo

Code repository for The Automation Ahead series, showcasing practical examples for GenAI-driven automation in investments. Each installment dives into specific tools, techniques, and use cases to help professionals assess and apply GenAI effectively.

• data-science
• deep-learning
• finance
• financial-data

Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning with autoencoders

• epigenomics
• pattern-search
• data-visualization
• interactive-machine-learning

Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.

• foundation-models
• gpt
• single-cell

High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations

Sample code for Core ML using ResNet50 provided by Apple and a custom model generated by coremltools.

• ios
• coreml
• coreml-framework
• swift

Agentic LLM CTF to test prompt injection attacks and preventions

The repository host gives no description.

Various examples of notebooks for working with web archives with the Archives Unleashed Toolkit, and derivatives generated by the Archives Unleashed Toolkit.

• notebooks
• pyspark-notebook
• juypter-notebook
• spark

Signal generators ( AD9833, AD9834, AD9850, ADF4351) tools box.

• ad9833
• ad9834
• ad9850
• adf4351

Clock generators ( Si5351 for now ) toolbox.

• si5351
• ft232h
• micropython
• esp32

Single Image Random Dot Stereogram for Tensorflow

• tensorflow
• jupyter-notebook
• 3d-reconstruction
• stereogram-creator

Interpretable drug response prediction with graph neural networks over drugs, cell lines, and genes.

🗺 General purpose U-Network implemented in Keras for image segmentation

• tensorflow
• cv
• cnn
• dnn