Repository Index

Fusing Histology and Genomics via Deep Learning - IEEE TMI

• pathomic
• fusion
• multimodal
• pathology

Every day, millions of traders around the world are trying to make money by trading stocks. These days, physical traders are also being replaced by automated trading robots. Algorithmic trading market has experienced significant growth rate and large number of firms are using it. I have tried to build a Deep Q-learning reinforcement agent model to do automated stock trading.

Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell

• histology
• wsi-images
• pan-cancer-analysis
• genomics

Open source remote sensing dataset with benchmarks

This trading-gym is the first trading for agent to train with episode of short term trading itself.

scikit-learn wrappers for Python fastText.

Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning

• tensorflow
• python3
• keras
• resnet-101

Wrapper for RDKit's RunReactants to improve stereochemistry handling

scPerturb: A resource and a python/R tool for single-cell perturbation data

• cite-seq
• database
• perturbation
• scatac-seq

The repository host gives no description.

This repository contains notebooks that show the usage of TensorFlow Lite for quantizing deep neural networks.

• tensorflow-2
• tensorflow-lite
• on-device-ml
• model-quantization

A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data

• source-energy-balance
• canopy
• soil
• radiometric-temperatures

⬛ Python Individual Conditional Expectation Plot Toolbox

• machine-learning
• interpretability

Optimising chemical reactions using machine learning

• chemistry
• machine-learning
• optimization
• bayesian-optimization

InferPy: Deep Probabilistic Modeling with Tensorflow Made Easy

• probabilistic-programming
• neural-network
• tensorflow
• keras-tensorflow

Quantitative Economics

tutorials made for biologists to learn deep learning

• biologists
• keras
• deeplearning
• deep-learning

Cyber Defence Monitoring Course Suite :: Suricata, Arkime (and others in the past)

• moloch
• suricata
• monitoring
• nsm

daru-view is for easy and interactive plotting in web application & IRuby notebook. daru-view is a plugin gem to the existing daru gem.

• daru
• daru-view
• data-visualization
• plot-library

Docker container for Kafka - Spark Streaming - Cassandra

Big Data essentials: Hadoop, MapReduce, Spark. Explore tutorials and demos in Jupyter notebooks—most are self-contained and live, ready to run with a click.

• big-data
• bigdata
• spark
• spark-sql

a nose plugin for finding and running IPython notebooks as nose tests

Code repository for The Automation Ahead series, showcasing practical examples for GenAI-driven automation in investments. Each installment dives into specific tools, techniques, and use cases to help professionals assess and apply GenAI effectively.

• data-science
• deep-learning
• finance
• financial-data

SplineDist: Automated Cell Segmentation with Spline Curves