Repository Index

Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network

Various examples of notebooks for working with web archives with the Archives Unleashed Toolkit, and derivatives generated by the Archives Unleashed Toolkit.

• notebooks
• pyspark-notebook
• juypter-notebook
• spark

Exploring the space of drug combinations to discover synergistic drugs using Active Learning

American Sign Language Detection is a deep learning end to end project where we can detect American Sign Language.

• asl
• keras
• tensroflow
• tflite

Signal generators ( AD9833, AD9834, AD9850, ADF4351) tools box.

• ad9833
• ad9834
• ad9850
• adf4351

Implementation of "Adversarial Frontier Stitching for Remote Neural Network Watermarking" in TensorFlow.

• tensorflow
• tensorflow2
• watermarking
• neural-network

Compiles Transportation Speed and Ridership Data

Attempt at reproducing a SGNN's projection layer, but with word n-grams instead of skip-grams. Paper and more: http://aclweb.org/anthology/D18-1105

CNN, Caffe, LaMem,Azure

A coding exercise: let's convert dirty machine learning code into clean code using a Pipeline - which is the Pipe and Filter Design Pattern applied to Machine Learning.

Graviton: verify your TEAL program by experiment and observation

• algorand
• avm
• blockchain
• pyteal

Display Youtube metrics using Google API and MicroPython

• esp32
• micropython
• micropython-esp32
• tft

Slides and materials for various talks I've given

Visualization Tool for GTFS-RT Bus Delays

• gtfs-rt
• transit
• transit-delays
• transit-network

Tools to support transit service analysis.

Investigating multilingual language models (BERT) by using them for NER in German and English

UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.

• benchmark
• bioinformatics
• cheminformatics
• computational-chemistry

Brain Computer Interface to drive car using brain.

FM Walkie Talkie using RDA5820N

• fm
• walkie-talkie
• rda5820
• rda5820n

Jupyter Kernel for ACL2

• acl2
• theorem-prover
• jupyter
• jupyter-kernel

An Icon classifier made with TFLite Model Maker and deployed to Android with ML Model Binding.

• tensorflow-lite
• tflite
• computer-vision
• deep-learning

Interpretable drug response prediction with graph neural networks over drugs, cell lines, and genes.

🗺 General purpose U-Network implemented in Keras for image segmentation

• tensorflow
• cv
• cnn
• dnn

Micropython Driver for CS5490 Energy Monitor IC