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Notebooks for financial economics. Keywords: Jupyter notebook pandas Federal Reserve FRED Ferbus GDP CPI PCE inflation unemployment wage income debt Case-Shiller housing asset portfolio equities SPX bonds TIPS rates currency FX euro EUR USD JPY yen XAU gold Brent WTI oil Holt-Winters time-series forecasting statistics econometrics
WebGL accelerated JavaScript molecular graphics library
Foundation Models for Genomics & Transcriptomics
Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
Integrated pipeline for multiplexed image analysis
PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.
BulkFormer: A large-scale foundation model for human bulk transcriptomes
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer
Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network