Repository Index

Single-cell fluorescence microscopy data analysis

• microscopy
• fluorescence-microscopy-imaging

mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance

• qa
• mri
• neuroimaging
• niqc

A python package to analyze the matrix fiber orientation and intensity around cells in fiber matrices (as a proxy for cellular forces).

• imaging
• microscopy
• contractility
• collagen

🔬Python package for high-throughput single-cell imaging analysis.

• microscopy-image-analysis
• single-cell-analysis