A collection of tools for painting super-resolution images
- microscopy
- super-resolution
- smlm
- dna-paint
Repository Index
47,133 repositories indexed
25–48 of 64 · Most stars
A dataset of 2D imagery, 3D point cloud data, and 3D vehicle bounding box labels all generated using the Grand Theft Auto 5 game engine.
Accurate and efficient spot detection for microscopy data
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
Inner ear models for Python
- python
- cochlea
- inner-ear
- model
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
The python-microscopy environment - an open-source package for light microscopy
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
- biology
- fluorescence
- image-analysis
- image-processing
python functions for simulating optical transfer functions
- microscopy
- numpy
Driver for the Bosch BME280 for use with MicroPython on ESP8266 boards
A minimal OSC client and server library for MicroPython.
- micropython
- osc
- python
- open-sound-control
Bosch BNO055 driver for MicroPython. IMU with hardware sensor fusion.
Gaussian processes and Bayesian optimization for images and hyperspectral data
- image-processing
- hyperspectral-images
- gaussian-processes
- bayesian-optimization
Easily dockerize your Git repository
A Python type checker
Pure Python library for reading NIS Elements ND2 images and metadata
- nd2
- pims
- nikon
- nis-elements
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
- stitching
- microscopy
- microscopy-images
- fluorescence-microscopy-imaging
Community maintained fork of https://github.com/dsacre/mididings
- midi-router-linux
- python-midi
- real-time-performance
- live-music-automation
Lightweight Open Sound Control implementation for Python using asyncio
- osc
- opensoundcontrol
- python
- asyncio
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
- bioimage-analysis
- cell-classification
- computer-vision
- digital-pathology
Lattice light-sheet post-processing utility.
- microscopy
- light-sheet
- image-processing
- image-analysis
Noise Correction Algorithm for sCMOS cameras
- cmos
- imaging
- noise
- readout
Single-cell fluorescence microscopy data analysis
- microscopy
- fluorescence-microscopy-imaging
An interactive image processing program for biologists written in Python.
- biologists
- python
- imagej
- calcium