The open LLM inference engine for AWS Trainium: NKI megakernels, 1M-token context, OpenAI-compatible API. By RunAnywhere.
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Brian is a free, open source simulator for spiking neural networks.
- python
- neuroscience
- science
- differential-equations
A Python package to visualise neuroanatomical data in atlas space
- neuroscience
- python
- anatomy
- visualization
Corpus legislativo brasileiro em larga escala e modelo Transformer causal treinado do zero em PyTorch puro.
cell detection in calcium imaging recordings
- imaging
- neuroscience
- data-analysis
PyC (Pytorch Concepts) is a PyTorch-based library for designing concept-based interpretable deep learning models.
- ai
- concepts
- explainable-ai
- interventions
Neuro-symbolic agents with verified memory. MCP math tools, an algebra repair Skill, and an open challenge. Verify solutions, learn checked rules, and reuse.
- ai-agents
- mathematics
- neuro-symbolic
- reasoning
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
The repository host gives no description.
Cell tracking and segmentation software
- cell-segmentation
- cell-tracking
- cell-tracking-challenge
- gurobi
PyTorch Connectomics: segmentation toolbox for EM connectomics
- computer-vision
- neuroscience
- connectomics
- pytorch
A micro neural network multilayer perceptron for MicroPython (used on ESP32 and Pycom modules)
- micropython
- neural-network
- multilayer-perceptron
- mlp
A Python interface to access neuroanatomical atlases
- neuroscience
- python
- microscopy
- registration
Read and write Neuroglancer datasets programmatically.
- neuroglancer
- volumetric-data
- python
- cloud
Automated 3D brain registration with support for multiple species and atlases.
- registration
- atlases
- brain
- neuroscience
NeoArch Package Manager for Arch Linux,endeavouros and Arch based distos — multi-source GUI (pacman, AUR, Flatpak, npm, pipx)
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
- neuroimaging
- reproducibility
- pipeline
- meta-analysis
Inner ear models for Python
- python
- cochlea
- inner-ear
- model
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
A lightweight HTTP request routing processing support library based on micropython. The previous name was micro-route
An interactive image processing program for biologists written in Python.
- biologists
- python
- imagej
- calcium
mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
- qa
- mri
- neuroimaging
- niqc
A professional Python tool and modern desktop GUI for converting academic citations and document formatting (APA 7, Harvard, Vancouver) in Microsoft Word (.docx) files.
- academia
- apa7
- citation-manager
- reference-formatting