cell detection in calcium imaging recordings
- imaging
- neuroscience
- data-analysis
Repository Index
47,133 repositories indexed
49–72 of 110 · Most stars
Run many AI agents at once on your Mac, up to 3x faster.
- agents
- apple-silicon
- artificial-intelligence
- inference-acceleration
Multiprocessing Pool Extensions
- python
- multiprocessing
- python3
- celery
aiomisc - miscellaneous utils for asyncio
- asyncio
- miscellaneous
- server-client
- service
A Python toolkit for processing tabular data
CellViT: Vision Transformers for Precise Cell Segmentation and Classification
- ai
- cell
- digitalpathology
- microscopy
UCE is a zero-shot foundation model for single-cell gene expression data
Using deep stacked residual bidirectional LSTM cells (RNN) with TensorFlow, we do Human Activity Recognition (HAR). Classifying the type of movement amongst 6 categories or 18 categories on 2 different datasets.
- tensorflow
- lstm
- rnn
- stacked-layers
amqplib fork
- python
- amqp-client
- amqp
- amqp-connection
[ECCV 2026] Official implementation of "HRDiT: Training-Free High-Resolution Image Generation with Off-the-Shelf Diffusion Transformer Models"
- diffusion-transformers
- eccv2026
- image-generation
- training-free
Drivers for InvenSense inertial measurement units MPU9250, MPU9150, MPU6050
- micropython
- sensor
- driver
- magnetometer
OPEM (Open Source PEM Fuel Cell Simulation Tool)
- chemistry
- pem
- fuel-cell
- opem
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
Codebase for "A Foundation Model for Cell Segmentation"
Cell tracking and segmentation software
- cell-segmentation
- cell-tracking
- cell-tracking-challenge
- gurobi
A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data
A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.
manim cell magic for IPython/Jupyter to show the output video
- jupyter-magic
- jupyer
- manim
- ipython-magic
Passive market-making bot for Predict.fun: quotes from live order books, replaces stale orders and cancels on unsafe price/depth; Windows desktop app and web console for Ubuntu servers.
- desktop-app
- market-making
- predict-fun
- prediction-markets
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
- cellprofiler-analyst
- cellprofiler
- image-analysis
- machine-learning
:seedling: Type stubs for Celery and its related packages
- celery
- mypy
- types
- stubs
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
Sample skills, scripts, and reference workflows for AI-assisted planning, setup, and configuration of Oracle Fusion Cloud Applications.
- ai-skills
- implementation-automation
- ai-powered-implementation
- fscr
A tool for cell instance aware segmentation in densely packed 3D volumetric images
- segmentation
- deep-learning
- bioinformatics
- neural-network