A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
- deep-learning
- pytorch
- deep-chemistry
- graph-neural-network
Repository Index
47,133 repositories indexed
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OpenChem: Deep Learning toolkit for Computational Chemistry and Drug Design Research
Generation of protein sequences and evolutionary alignments via discrete diffusion models
- discrete-diffusion
- generative-model
- multiple-sequence-alignment
- protein-sequences
Modular file scanning/analysis framework
- python
- analytic-machines
- analysis-framework
- python-script
The Agentic Scientist: Orchestrating Coding Agents for Automated Scientific (Co-)Discovery
Music discovery tool that provides recommendations based on selected Lidarr artists, using Spotify or LastFM.
🎯 A comprehensive gradient-free optimization framework written in Python
- metaheuristics
- optimization
- optimization-algorithms
- python
AI-first external attack surface assessment with continuous discovery, evidence-based vulnerability validation, and developer-agent MCP integration.
- ai
- attack-surface-management
- bbot
- cybersecurity
Molecular Processing Made Easy.
- python
- molecule
- rdkit
- drug-discovery
Community Discovery Library
- community-discovery
- complex-networks
- community-evaluation
- cdlib
aiomisc - miscellaneous utils for asyncio
- asyncio
- miscellaneous
- server-client
- service
TranslatedOne zero-dependency MCP gateway CLI for every server and agent skill. Token optimization, tool discovery and context compression: 71,929 -> 581 tokens (-99.2%, measured), schemas stay out of context. One config for Claude Code, Codex, Cursor, every agent. 561KB, pure Python. | Zero-dependency CLI: manages all MCP tools and skills, and tool discovery saves 99.2% of tokens.
- mcp
- claude
- claude-code
- cursor
The repository host gives no description.
- auditing-predictive-models
- fairness
- discrimination
- toolbox
ROPMEMU is a framework to analyze, dissect and decompile complex code-reuse attacks.
An evidence-preserving Chinese-to-English manuscript translation and review workflow for computing, medicine and other STEM disciplines.
This script is made to collect the most valiable artifacts for foreniscs or incident reponse investigation rather than imaging the whole har drive.
BatchFlow helps you conveniently work with random or sequential batches of your data and define data processing and machine learning workflows even for datasets that do not fit into memory.
- python3
- data-science
- machine-learning
- python
A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.
ChemML is a machine learning and informatics program suite for the chemical and materials sciences.
- quantum-mechanics
- materials-informatics
- data-science
- machine-learning
LLM for Drug Editing, ICLR 2024
- chatgpt
- conversation
- drug
- drug-discovery
TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
- self-attention
- compound-protein-interaction
- transformercpi
- structure-free-virtual-sreening
DiscoveryRSI: Recursively Learning to Discover Valuable Hypotheses
- agent-framework
- agentic-workflow
- aiforscience
- llm-agents
A Discord bot to handle League of Legends in-house games.
PHP CVE-2026-109618/109619 — self-contained unauthenticated RCE on stock PHP 8.5.11 (in-band PS(id)→cookie memory disclosure + UAF chain), full control ladders, fixed-version negative control on 8.5.12
- cve-2026-109618
- cve-2026-109619
- exploit
- memory-corruption