🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.
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An information security preparedness tool to do adversarial simulation.
- uber
- vagrant
- yaml
- celery
What did I do on February 14th 2007? Visualize your (digital) life in Org-mode
Converting Can (Controller Area Network) Database Formats .arxml .dbc .dbf .kcd ...
- canbus
- python
- dbc
- arxml
Cloud-native genomic dataframes and batch computing
- genetics
- vcf
- genomics
- gwas
allRank is a framework for training learning-to-rank neural models based on PyTorch.
- learning-to-rank
- ndcg
- ranking
- information-retrieval
A powerful todo list application for the console, using the todo.txt format.
- todoapp
- cli
- python
- todotxt
FactCircuit: an auditable claim-and-evidence verification loop with immutable provenance, staged checks, bounded retrieval, and reproducible evaluation.
- accuracy-decline
- ai-safety
- audit-trail
- fact-checking
An add-on for Blender allowing to create URDF, SDF and SMURF robot models in a WYSIWYG environment.
A JupyterLab plugin to facilitate invocation of code formatters.
- jupyterlab-extension
- jupyterlab-extensions
- yapf
- black
Plant phenotyping with image analysis
- science
- bioinformatics
- image-analysis
- plant-phenotyping
CommonMark compliant Markdown formatter
Python package for graph neural networks in chemistry and biology
- deep-learning
- graph-neural-networks
- dgl
- cheminformatics
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
- dna
- k-mer
- python
- bloom-filter
DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome
- kmer
- dnabert-model
- kmer-format
- gpu
Tor2web is an HTTP proxy software that enables access to Tor Hidden Services by mean of common web browsers
- twisted
- python
- proxy
- tor
This repo offers a simple interface that helps you to read&summerize research papers in pdf format. You can ask some questions after reading. This interface is developed based on openai API and using GPT-3.5-turbo model.
Evaluation functions for music/audio information retrieval/signal processing algorithms.
Interactive network visualization in Python and Dash, powered by Cytoscape.js
- plotly-dash
- plotly
- dash
- cytoscape
Music Structure Analysis Framework
- music-information-retrieval
Molecular Processing Made Easy.
- python
- molecule
- rdkit
- drug-discovery
Vision-Language Pathology Foundation Model - Nature Medicine
- bioimage-analysis
- bioimage-informatics
- conch
- foundation-model
TruFont is a font editor that uses the UFO font format and offers Python scripting.
:sound: spafe: Simplified Python Audio Features Extraction