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97–120 of 228 · Most stars

A powerful todo list application for the console, using the todo.txt format.

  • todoapp
  • cli
  • python
  • todotxt

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

  • deep-learning
  • protein-sequences
  • protein-structure
  • semi-supervised-learning

Generation of protein sequences and evolutionary alignments via discrete diffusion models

  • discrete-diffusion
  • generative-model
  • multiple-sequence-alignment
  • protein-sequences

Light-weight camera LiDAR calibration package for ROS using OpenCV and PCL (PnP + LM optimization)

  • ros-kinetic
  • camera-calibration
  • lidar-camera-calibration
  • point-cloud

Universal SKILL.md catalog for research workflows: literature review, research design, project memory, manuscript writing, and cross-agent delegation for Claude Code, Codex, Gemini, Cursor, OpenClaw, and generic AI clients.

  • academic-writing
  • ai-skills
  • notebooklm
  • obsidian

Oracle3: open-source trading engine and MCP server for prediction markets. Finds fee-adjusted no-arbitrage violations across related event contracts and trades them live on Kalshi, Polymarket and Solana, or on paper, under pre-trade risk limits. 13 MCP tools, JSON CLI, agent skills, 600+ tests.

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

  • histopathology-images
  • microscopy
  • sliding-windows
  • medical-image-analysis