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HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.
3D shape analysis using deep learning
Lattice light-sheet post-processing utility.
An interactive image processing program for biologists written in Python.
A Python library which extracts strokes (outlines) from an SVG file as a series of line segments appropriate for driving pen plotters
Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.
A small Python module for BMP image processing.
A python package to analyze the matrix fiber orientation and intensity around cells in fiber matrices (as a proxy for cellular forces).
tablib renderer (xlsx, xls, csv) for pyramid
Panoptic segmentation algorithms for 2D and 3D electron microscopy images
Simple utility to print vpype SVG files to the Panasonic Penwriter line of plotters