Read and write Neuroglancer datasets programmatically.
- neuroglancer
- volumetric-data
- python
- cloud
Repository Index
47,133 repositories indexed
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Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.
- nlp
- medical
- text-mining
- clinical-data-warehouse
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
DH3D: Deep Hierarchical 3D Descriptors for Robust Large-Scale 6DOF Relocalization
- point-cloud
- deep-learning
- relocalization
- feature-learning
PhysAg3D: Bridging 3D Generative and Agentic Models for High-Fidelity and Physically-Interactive Assets
Free, open-source SEO audits inside OpenAI Codex CLI. Port of claude-seo: 26 skills, 19 specialist roles, technical SEO / schema / GEO / local / ecommerce.
Hierarchical Attentive Recurrent Tracking
- neural-nets
- object-tracking
- attention-mechanism
- rnn
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
Parse sample tests of Codeforces competitions, and generate tests automatically.
PAthological QUpath Obsession - QuPath and Python conversations
- digital-pathology
- qupath
- python
A cross-platform modding language for GameMaker games. // Moved to Codeberg! https://codeberg.org/katsaii/catspeak-lang
- domain-specific-language
- gamemaker-studio-2
- dynamically-typed
- compiler
Mock an SSH server and define all commands it supports (Python, Twisted)
Analyze, visualize, and process sound field data recorded by spherical microphone arrays.
- python
- sound
- analysis
- package
:dart: Accurate sums and dot products for Python.
- mathematics
- numerical-methods
- engineering
- accuracy
Cake Fuzzer is a project that is meant to help automatically and continuously discover vulnerabilities in web applications created based on specific frameworks with very limited false positives.
- cybersecurity
- hacking
- iast
- dast
A CLI tool to automatically add type annotations into Python code. Must have tool for annotating existing code.
- code-formatter
- code-generation
- mypy
- pyannotate
An NLP library for Uralic languages such as Finnish, Skolt Sami, Moksha and so on. Also supporting some non-Uralic languages such as Spanish, French, Arabic, Swedish, Norwegian, Russian and English. LLMs, FSTs and More!
- nlp-library
- uralic-languages
- finnish
- sami
Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy
- biology
- fluorescence
- image-analysis
- image-processing
AI-powered SDK featuring algorithmic trading, backtesting, deployment on 100+ exchanges, and multiple optimization engines.
TypeDB Bio: Biomedical Knowledge Graph
- bioinformatics
- knowledge-graph
- knowledge-base
- drug-discovery
TensorFlow implementation of the paper "Hierarchical Attention Networks for Document Classification"
- text-classification
- sentiment-analysis
- hierarchical-attention-networks
- document-classification
RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
- biological-images
- root
- painter
- segmentation
python functions for simulating optical transfer functions
- microscopy
- numpy