Repository Index

A Tensorfflow implementation of Attend, Infer, Repeat

• tensorflow
• vae
• neural-networks
• attention-mechanism

NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions

• computational-biology
• bioinformatics
• graph-convolution
• deep-learning

Autonomous multi-agent framework to optimize scientific software

• acceleration
• agentic-ai
• ai-agents
• bioinformatics

A fast MDCT implementation using SciPy and FFTs

• scientific-computing
• signal-processing
• scipy
• audio-analysis

An Easy To Use PyTorch Computer Vision Library

• computer-vision
• deep-learning
• pytorch
• pytorch-lightning

🛡️ Free AI that blocks hackers while you sleep. Runs on cheap hardware. When someone in Tokyo gets attacked, you're protected in 30 seconds. No fees. No experts needed. Just protection. One node's detection → everyone's protection.

• ai-security
• cybersecurity
• ids
• iot-security

With a clear and graphically appealing GUI you can access the system deeply, overclock the Pi or replace the entire desktop environment. Everything you need to use the Pi as a desktop computer. PiGro does many commands that have to be entered via the terminal with one or two clicks of a button.

• gui
• app-store
• gui-script
• install

MCP server for spatial transcriptomics analysis through natural language interfaces.

• bioinformatics
• cell-communication
• deconvolution
• machine-learning

A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources

• bioimage-analysis
• cell-classification
• computer-vision
• digital-pathology

Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.

• alphafold3
• docking
• drug-design
• drug-discovery

Python3 script that transfers files in Google Colab 10-50x faster, using multi-threaded parallel copying between Google Drive locations.

• colab-notebook
• multithreading
• parallel-computing
• copy

Course materials for Zurich Initiative for Computational Economics (ZICE) 2014

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

• bioinformatics
• cell-type-deconvolution
• computational-biology
• deconvolution

A simple MPU6050 driver written in micropython

MicroPython I2C driver for MPU6886 6-axis motion tracking device

• micropython
• mpu6886

Computer Algebra for microcontrollers using https://github.com/micropython/micropython

Extract documentation from Ansible modules

• python
• ansible
• documentation
• ansible-modules

Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding

• autoencoder
• imputation
• integration
• multimodal

A lightweight Python package for teaching computational methods through art history. Extract and analyze artist-specific works from WikiArt with built-in visualizations. Designed for digital humanities and computational design courses. Features genre/style analysis, matplotlib integration, and pedagogical clarity over algorithmic complexity.

• art-history
• color-analysis
• color-extraction
• color-palette

A full-text search engine running on Golem Network.

• golem
• golem-network
• fulltext-search
• fulltextsearch

Simple library for MPU6050 on ESP8266 with micropython

A browser workspace connecting research projects, apps, and collaborators

• cli
• django
• docker
• python

Mutta Puffs is a sports league scheduler automated on thousands of computers from decentralized market of computational power in Golem.

Sunrise and sunset time computation for MicroPython