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Tags: Graphics and 3D
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1–7 of 7 · Most stars

Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy

  • imagej
  • scikit-image
  • opencv
  • simpleitk

A Python package to analyze matrix fiber orientation and intensity around cells as a proxy for cellular forces. Also measures alignment relative to X/Y axes, points and lines, with optional masks, a Python API and browser tools for analysis and group comparisons.

  • contractility
  • orientation
  • fibrosis
  • mechanobiology