An open-source application for biological image analysis
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Read and write Neuroglancer datasets programmatically.
- neuroglancer
- volumetric-data
- python
- cloud
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
- stitching
- microscopy
- microscopy-images
- fluorescence-microscopy-imaging
An interactive image processing program for biologists written in Python.
- biologists
- python
- imagej
- calcium
A Python package to analyze matrix fiber orientation and intensity around cells as a proxy for cellular forces. Also measures alignment relative to X/Y axes, points and lines, with optional masks, a Python API and browser tools for analysis and group comparisons.
- contractility
- orientation
- fibrosis
- mechanobiology