Python Imaging Library (fork)
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Node-based Visual Programming Toolbox
AI Toolkit for Healthcare Imaging
A deep learning toolkit for healthcare AI: EHR (MIMIC, eICU, OMOP), clinical text, signals and imaging. 30+ models, reproducible pipelines.
3D medical imaging reconstruction software
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Clinical Histopathology Imaging Evaluation Foundation Model
An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.
Vision-Language Pathology Foundation Model - Nature Medicine
U-Net Brain Tumor Segmentation
cell detection in calcium imaging recordings
Tools for computational pathology
Neural networks toolbox focused on medical image analysis
Produce a sharp image of a planetary system object (moon, sun, planets) from many seeing-affected frames according to the "lucky imaging" technique.
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
Automated 3D cell detection in very large images
Deep and Machine Learning for Microscopy
This script is made to collect the most valiable artifacts for foreniscs or incident reponse investigation rather than imaging the whole har drive.
AI-based pathology predicts origins for cancers of unknown primary - Nature
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
An open-source imaging workbench for making and studying SDR and HDR images from sensor data
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
Tool for segmentation in bioimaging
Noise Correction Algorithm for sCMOS cameras