Genetic Algorithm, Particle Swarm Optimization, Simulated Annealing, Ant Colony Optimization Algorithm,Immune Algorithm, Artificial Fish Swarm Algorithm, Differential Evolution and TSP(Traveling salesman)
- genetic-algorithm
- pso
- particle-swarm-optimization
- tsp
Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.
- mesa
- agent-based-modeling
- agent-based-simulation
- simulation-framework
Biological foundation modeling from molecular to genome scale
:chart_with_upwards_trend: Adaptive: parallel active learning of mathematical functions
Official Repository for the Uni-Mol Series Methods
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
OpenChem: Deep Learning toolkit for Computational Chemistry and Drug Design Research
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.
- deep-learning
- protein-sequences
- protein-structure
- semi-supervised-learning
FiPy is a Finite Volume PDE solver written in Python
Module for statistical learning, with a particular emphasis on time-dependent modelling
🎯 A comprehensive gradient-free optimization framework written in Python
RNA Velocity generalized through dynamical modeling
A Python native dynamical system simulation framework in the block diagram paradigm.
- blockdiagram
- control-systems
- hierarchical-modeling
- nonlinear-dynamics
A model generator for energy system modelling and optimisation (LP/MILP).
- energy
- energy-system
- modelling
- modelling-framework
City Energy Analyst (CEA) is an open-source urban building energy modeling (UBEM) platform and computation tool for the design of low-carbon and highly efficient cities.
- python
- urban-design
- urban-analytics
- ubem
Bi-Directional Equivariant Long-Range DNA Sequence Modeling
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
Cryptographic Dataset Generation & Modelling Framework
Small size matrix handling module with a few linear algebra operations specifically for MicroPython (Python3)