Repository Index

Tools for computational pathology

• machine-learning
• digital-pathology
• computational-pathology
• biomedical-image-processing

Automated 3D cell detection in very large images

• microscopy
• cell-detection
• deep-learning
• image-analysis

Python package for image-based profiling

• cytominer
• microscopy
• morphological-profiling
• python

Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

• biology
• fluorescence
• image-analysis
• image-processing

Lattice light-sheet post-processing utility.

• microscopy
• light-sheet
• image-processing
• image-analysis