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Villain is a high level stage 0/1 C2 framework that can handle multiple reverse TCP & HoaxShell-based shells, enhance their functionality with additional features (commands, utilities) and share them among connected sibling servers (Villain instances running on different machines).
The Ultimate Information Gathering Toolkit
Ragpicker is a Plugin based malware crawler with pre-analysis and reporting functionalities. Use this tool if you are testing antivirus products, collecting malware for another analyzer/zoo.
A set of Maltego transforms for VirusTotal Public API v2.0. This set has the added functionality of caching queries on a daily basis to speed up resolutions.