Repository Index

Efficiently computes derivatives of NumPy code.

• autograd
• automatic-differentiation
• numpy
• python

Karate Club: An API Oriented Open-source Python Framework for Unsupervised Learning on Graphs (CIKM 2020)

• community-detection
• graph-clustering
• deepwalk
• networkx

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

• histopathology-images
• microscopy
• sliding-windows
• medical-image-analysis

Tools for computational pathology

• machine-learning
• digital-pathology
• computational-pathology
• biomedical-image-processing

OPAL: a reactive optimizer. A coding agent rewrites the optimizer while your model trains.

• deep-learning
• llm-agents
• optimizer
• pytorch

AI-based pathology predicts origins for cancers of unknown primary - Nature

• histology
• pathology
• wsi-images
• histopathology

Long-term, cross-project memory for AI coding agents. Your own Obsidian vault as the source of truth. Daemonless and without opaque databases, your memory belongs to you.

• agentmemory
• ai
• ai-agents
• claude

GNN-based gene-selection deep learning model for drug response prediction