Official git repository for Biopython (originally converted from CVS)
- python
- bioinformatics
- genomics
- biopython
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Official repository for the Boltz biomolecular interaction models
- binding-prediction
- drug-discovery
- protein-structure
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.
Generative biopolymer design with rich conditioning.
TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
- self-attention
- compound-protein-interaction
- transformercpi
- structure-free-virtual-sreening
Accurate and efficient spot detection for microscopy data
Toolbox for the analysis of smFISH images.
- pattern-classification
- rna-localization
- segmentation
- smfish
PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarity Augmentation"
Interpretable modeling of cellular responses to drug perturbations using cycle consistence learning
DeepAEG: A model for predicting cancer drug response based on data enhancement and edge-collaborative update strategies
GNN-based gene-selection deep learning model for drug response prediction