Official git repository for Biopython (originally converted from CVS)
- python
- bioinformatics
- genomics
- biopython
Repository Index
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Official repository for the Boltz biomolecular interaction models
- binding-prediction
- drug-discovery
- protein-structure
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
- pytorch
- protein-structure
- alphafold2
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.
- deep-learning
- protein-sequences
- protein-structure
- semi-supervised-learning
Official release of the ProGen models
- language-model
- protein
- generative-model
Generation of protein sequences and evolutionary alignments via discrete diffusion models
- discrete-diffusion
- generative-model
- multiple-sequence-alignment
- protein-sequences
OmegaFold Release Code
A Python Package for Protein Dynamics Analysis
- python
- protein
- dynamics
Generative biopolymer design with rich conditioning.
A tool for semi-automatic cell type classification
- python
- single-cell
- machine-learning
- scrna-seq
A dependency-free cross-platform swiss army knife for PDB files.
- python
- protein
- pdb
- bioinformatics