Repository Index

Fast, sensitive and accurate integration of single-cell data with Harmony

• scrna-seq
• algorithm
• data-integration
• r

Code and data used to create the examples in "Evidence-based Software Engineering based on the publicly available data"

• cognitive-capitalism
• cognitive-science
• economic-models
• ecosystem-modeling

Tidy anomaly detection

• detect-anomalies
• decomposition
• iqr
• time-series

Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome

• cancer-genomics
• cnv-detection
• single-cell
• phylogeny