Repository Index

Claude Code dashboard: see where your limits are headed before you hit them. Calibrated usage forecasts, live rate-limit gauges, session costs, memory browser. Single binary, zero config, plus a VS Code extension.

faabiosr / echo-middleware

Go 16 4

Go package that provides multiple middlewares for Echo Framework.

echo-framework
middlewares
golang

SciRuby / statsample-timeseries

Ruby 14 4

Bioruby Statsample TimeSeries

LigandPro / Bento

Jupyter Notebook 13 0

UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.

menchelab / BioProfiling.jl

Julia 13 1

A flexible Julia toolkit for high-dimensional cellular profiles

julia
morphological-analysis
high-content-screening

quon-titative-biology / scPair

Python 13 1

scPair: Boosting single cell multimodal analysis by leveraging single cell atlases and implicit feature selection

davidbhr / CompactionAnalyzer

Python 12 1

A Python package to analyze matrix fiber orientation and intensity around cells as a proxy for cellular forces. Also measures alignment relative to X/Y axes, points and lines, with optional masks, a Python API and browser tools for analysis and group comparisons.

contractility
orientation
fibrosis
mechanobiology

kilicogluh / Bio-SCoRes

Java 10 1

A smorgasbord architecture for coreference resolution in biomedical text

biot2 / Yaml.Json.Parser.pas

Pascal 9 1

YAML and JSON parser, serializer and deserializer with YAML to JSON and vice versa conversion tools containing pure Object Pascal source code for both Delphi and Lazarus

delphi
fpc
json
json-deserialization

nickdelgrosso / dna-transcription-kata

8 6

Bioinformatics-themed kata for practicing string manipulation in a data transformation pipeline. Contains replit files to work quickly in an online dojo setting.