Repository Index

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

• bioinformatics
• cell-type-deconvolution
• computational-biology
• deconvolution

PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarity Augmentation"

Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.

• microscopy
• image-processing
• segmentation
• biology

ODE system solver made simple. For IVPs (initial value problems).

• runge-kutta-fehlberg
• runge-kutta
• simulation
• ode-solver

An ordinary differential equation solving library in golang.

• ode
• solving-library
• multivariate
• differential-equations

Ruby client for interacting with the NASA (POWER) Agroclimatology Web Resource

• solar-radiation
• nasa
• agriculture
• ruby

Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding

• autoencoder
• imputation
• integration
• multimodal

Julia interface to quarto-cli

mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance

• qa
• mri
• neuroimaging
• niqc

A flexible Julia toolkit for high-dimensional cellular profiles

• julia
• morphological-analysis
• high-content-screening

Simple, reliable .NET libraries covering numbers, geometry and data structures

• collections
• geometry
• numerics
• csharp

Astronomical FITS image analysis tool for detecting asteroids, comets, satellites, moving objects, and transients in astrophotography data.

• astronomy
• astronomy-software
• astrophotography
• moving-object-detection

Utility library to pretty print physical values in proper metric units

• ada2012
• ada
• utility-library
• formatting-output

Winner of the Golem Gitcoin Hackathon 2020 (https://blog.golemproject.net/meet-the-winners-golem-gitcoin-hackathon-2020/). This app lets people design, simulate, and analyse antenna arrays without the need to utilize commercial and expensive applications.

• golem

XitoSBML - the spatial SBML plugin for ImageJ

• sbml
• systems-biology
• spatial-sbml-plugin
• imagej

Extra contribution for mathcomp

• theorem-proving
• primality-test
• matroid
• rsa-algorithm

This is a class module in beta state to implement computations with large integers and reals/rationals numbers, while proposing representation of numerical values as scientific notation, allowing to obtain several cohorts for the same number (a lot of fun!).

• arithmetic
• biginteger
• biginteger-library
• fractional

DeepAEG: A model for predicting cancer drug response based on data enhancement and edge-collaborative update strategies

Distributed Simulation of Transport Networks

Fully functional Hungarian Algorithm implementation in Ada

• hungarian-algorithm
• ada
• munkres
• kuhn

High performance, zero-allocation, low memory usage (8 bytes), low precision (17 digits), partially compatible with int64 and shopspring Decimal