Probabilistic cell segmentation for in situ spatial transcriptomics
Repository Index
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A command-line utility for quick math.
Practical volume computation and sampling in high dimensions
- geometry
- statistics
- polyhedral-computations
- random-walk
Associated Repository for "Translation between Molecules and Natural Language"
A collection of useful mathematical functions in Elixir with a slant towards statistics, linear algebra and machine learning
Wrapper for RDKit's RunReactants to improve stereochemistry handling
scPerturb: A resource and a python/R tool for single-cell perturbation data
- cite-seq
- database
- perturbation
- scatac-seq
A Python package for molecular docking with an extensive, highly-curated dataset and a set of realistic benchmark tasks for drug discovery.
The official NFFT library repository
- nfft
- fftw
- fourier-transform
- c
Molecule Validation and Standardization
- rdkit
- python
- chemistry
- cheminformatics
Simple RDKit molecule editor GUI using PySide
ChemML is a machine learning and informatics program suite for the chemical and materials sciences.
- quantum-mechanics
- materials-informatics
- data-science
- machine-learning
Dlang Core Library
- ndslice
- iterator
- range
- algorithms
Trick Simulation Environment. Trick provides a common set of simulation capabilities and utilities to build simulations automatically.
Repository for Nicheformer: a foundation model for single-cell and spatial omics
PhyloNetworks: a julia package with utilities for phylogenetic networks
Interoperable web-based DICOM slide microscopy viewer and annotation tool
A script to run structural alerts using the RDKit and ChEMBL
A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data
- source-energy-balance
- canopy
- soil
- radiometric-temperatures
Schema and data analyzer for MongoDB written in Go.
Sparse matrix formats for linear algebra supporting scientific and machine learning applications
- go
- golang
- matrix
- scientific-computing
A library of abstract interfaces for mathematical structures in Coq [maintainer=@spitters,@Lysxia]
- coq-library
- typeclasses
- mathematics
- coq
LLM for Drug Editing, ICLR 2024
- chatgpt
- conversation
- drug
- drug-discovery
Fork of https://gitlab.mpcdf.mpg.de/mtr/pocketfft to simplify external contributions