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Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.
Encapsulate measurements and their units in Ruby and Ruby on Rails.
Neural networks toolbox focused on medical image analysis
A fully featured, pythonic library for representing and using quaternions
Collection of self-contained header-only libraries for C++17
The TiGL Geometry Library to process aircraft geometries in pre-design.
GraphDTA: Predicting drug-target binding affinity with graph neural networks
Source code for "DeepDTA: deep drug-target binding affinity prediction"
The universe in numbers. Free, open-source calculators for everything countable.
OpenAeroStruct is a lightweight tool that performs aerostructural optimization using OpenMDAO.
City Energy Analyst (CEA) is an open-source urban building energy modeling (UBEM) platform and computation tool for the design of low-carbon and highly efficient cities.
Interactive 2D wave optics simulator. Turn any image into a refractive scene, add sources, watch waves refract, diffract and interfere. Probes, intensity maps, video export.
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
Schema and generated objects for biolink data model and upper ontology
RNA-seq prediction with deep convolutional neural networks.
TriWild: Robust Triangulation with Curve Constraints
Formal proof of the Four Color Theorem [maintainer=@ybertot]
ChEMBL database structure pipelines
Open Parser for Systematic IUPAC Nomenclature. Chemical name to structure conversion
Azure friendly DICOMweb part 18 .NET server with qido-rs, wado-rs, stow-rs, wado-uri RESTful implementation
OPEM (Open Source PEM Fuel Cell Simulation Tool)
Automated 3D cell detection in very large images
High performance computational platform in Python for the spectral Galerkin method
TranslatedAcademic research library for DSH — search, cite, approve imports, hand off notes. Also: a research literature library plugin for DeepSeek Harness: search papers, include sources, approve imports into the library, and hand off note leads to other plugins in the same session.