Repository Index

Data Access Client for Global Surface Summary of the Day (GSOD) Weather Written in R

• r
• weather-data
• gsod
• ncdc

PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.

🔟 Implementation of rational number arithmetic for .NET with arbitrary precision.

• arbitrary-precision
• biginteger
• bigrational
• c-sharp

A math and collisions library for Lua.

• math
• intersection
• lua

Toolbox for the analysis of smFISH images.

• pattern-classification
• rna-localization
• segmentation
• smfish

TypeDB Bio: Biomedical Knowledge Graph

• bioinformatics
• knowledge-graph
• knowledge-base
• drug-discovery

The Mines Java Toolkit

• geophysics
• scientific-computing
• visualization
• mines-java-toolkit

The Configurable Math Library

• vector-math
• expression-template
• cplusplus-11
• graphics

slick is a simple to use polygon collision library inspired by bump.lua

This library generates graph layouts using the TikZ graph layout package.

The Massively Parallel Quantum Chemistry program, MPQC, computes properties of atoms and molecules from first principles using the time independent Schrödinger equation.

Variations on Kirby & Paris' hydra battles and other entertaining math in Coq (collaborative, documented, includes exercises) [maintainer=@Casteran]

• coq
• hydra-battles
• ordinal-notations
• formal-proofs

NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions

• computational-biology
• bioinformatics
• graph-convolution
• deep-learning

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

• r
• neuroanatomy-toolbox
• cran
• neuron

Fast detection of repackaged Android applications based on the comparison of resource files included into the package.

• android
• android-security
• repackaging-detection
• java

MAT is library for working with multi-dimensional arrays which supports efficient interfacing to foreign and CUDA code. BLAS and CUBLAS bindings are available.

Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.

Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning with autoencoders

• epigenomics
• pattern-search
• data-visualization
• interactive-machine-learning

A matrix package for common lisp building on work by Mark Hoemmen, Evan Monroig, Tamas Papp and Rif.

Research experiments exploring uncommon quant techniques.

• analysis
• jupyter-notebook
• python
• quant

A open source ballistics calculator

• ballistics
• vala
• gtk3
• meson

A set of protocols for Arithmetic, Statistics and Logical operations

Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications

• cell-annotation
• multiplexed-imaging
• mpif

A simple ffi-accelerated vector library for everyone