Bi-Directional Equivariant Long-Range DNA Sequence Modeling
Repository Index
73,862 visible repositories in the index
289–312 of 466 · Most stars
Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell
- histology
- wsi-images
- pan-cancer-analysis
- genomics
Correctly rounded decimals for Go
- decimal
- financial
- floating-point
- general-decimal-arithmetic
Ankh: Optimized Protein Language Model
CoqHammer: An Automated Reasoning Hammer Tool for Rocq - Proof Automation for Dependent Type Theory
- coq
- hammer
- automation
- proof-search
Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome
- cancer-genomics
- cnv-detection
- single-cell
- phylogeny
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
Graph-based molecule modeling toolkit for cheminformatics
- cheminformatics
- molecular-modeling
- chemistry
- toolkit
Wide-Integer implements a generic C++ template for uint128_t, uint256_t, uint512_t, uint1024_t, etc.
- high-performance
- embedded-systems
- multiprecision
- numerical
a unified framework for modeling chemically reactive systems
- chemical-equilibrium
- chemical-kinetics
- reactive-transport
- chemical-reactions
:spider_web: Simple mesh generator inspired by distmesh.
- mesh
- finite-elements
- mathematics
- mesh-generation
TranslatedAcademic research library for DSH — search, cite, approve imports, hand off notes. Also: a research literature library plugin for DeepSeek Harness: search papers, include sources, approve imports into the library, and hand off note leads to other plugins in the same session.
- academic
- agentero
- ai-agents
- citations
A formalization of geometry in Coq based on Tarski's axiom system
Umbrella package of the 'spatstat' family................
- r
- spatial-analysis
- spatial-data
- spatstat
A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.
A high-performance, high precision, zero allocation fixed-point decimal library for financial applications
- golang
- high-performance
- zero-allocation
- money
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
- cancer-imaging-research
- radiomics
- radiomics-features
- machine-learning
A command-line utility for quick math.
Code that makes the Iowa Environmental Mesonet run, or run into the ground.
- weather
- mesonet
- iowa
Associated Repository for "Translation between Molecules and Natural Language"
Fast Math Library for Delphi
- delphi-rtl
- delphi-fastmath
- fastmath
- overloaded-operators
scPerturb: A resource and a python/R tool for single-cell perturbation data
- cite-seq
- database
- perturbation
- scatac-seq
AI-based pathology predicts origins for cancers of unknown primary - Nature
- histology
- pathology
- wsi-images
- histopathology
Open source tumor evidence matching for sequencing labs and hospitals without molecular tumor boards. Research prototype; oncologist review required.
- bioinformatics
- cancer-research
- computational-biology
- drug-repurposing