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Tags: Science and math
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289–312 of 659 · Most stars

A lightweight high performance tensor algebra framework for modern C++

  • tensors
  • tensor-contraction
  • multidimensional-arrays
  • simd

LibTomMath is a free open source portable number theoretic multiple-precision integer library written entirely in C.

  • mpi
  • libtommath
  • c
  • math

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

  • dna
  • k-mer
  • python
  • bloom-filter

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

  • kmer
  • dnabert-model
  • kmer-format
  • gpu

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

  • deep-learning
  • protein-sequences
  • protein-structure
  • semi-supervised-learning

An open library for the analysis of molecular dynamics trajectories

  • molecular-dynamics
  • python
  • mdtraj
  • rmsd

A Go package for engineering organisms.

  • synthetic-biology
  • synbio
  • genetic-engineering
  • molecular-biology