A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.
Repository Index
47,133 repositories indexed
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PyTorch Connectomics: segmentation toolbox for EM connectomics
- computer-vision
- neuroscience
- connectomics
- pytorch
Medical LLM agent and MRI segmentation workspace built on PharmaLLM, with LangGraph, vLLM, and BEU-Net.
A high-performance, high precision, zero allocation fixed-point decimal library for financial applications
- golang
- high-performance
- zero-allocation
- money
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
- cancer-imaging-research
- radiomics
- radiomics-features
- machine-learning
Probabilistic cell segmentation for in situ spatial transcriptomics
A general library for geometry operations of union, intersections, difference, and xor
- computational-geometry
- union
- intersection
- xor
Practical volume computation and sampling in high dimensions
- geometry
- statistics
- polyhedral-computations
- random-walk
Associated Repository for "Translation between Molecules and Natural Language"
The RAW JavaScript Quaternion library
- quaternion
- angle
- conjugate
- math
A collection of useful mathematical functions in Elixir with a slant towards statistics, linear algebra and machine learning
A Network Integration Approach for Drug-Target Interaction Prediction
A C# DICOM Library
- dicom
- medical-physics
- radiology
- radiation-oncology
scPerturb: A resource and a python/R tool for single-cell perturbation data
- cite-seq
- database
- perturbation
- scatac-seq
A Python interface to access neuroanatomical atlases
- neuroscience
- python
- microscopy
- registration
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.
Molecule Validation and Standardization
- rdkit
- python
- chemistry
- cheminformatics
Multi-dimensional Swift math
- math
- swift
AI-based pathology predicts origins for cancers of unknown primary - Nature
- histology
- pathology
- wsi-images
- histopathology
A simple cross platform .NET API for Intel MKL
- mkl
- cross-platform
- matrix
- linear-algebra
The implementation code for "DAGAN: Deep De-Aliasing Generative Adversarial Networks for Fast Compressed Sensing MRI Reconstruction"
- generative-adversarial-network
- mri-reconstruction
- computer-vision
- deep-learning
Dlang Core Library
- ndslice
- iterator
- range
- algorithms
Trick Simulation Environment. Trick provides a common set of simulation capabilities and utilities to build simulations automatically.
An automatic code generator for nonlinear model predictive control (NMPC) and the continuation/GMRES method (C/GMRES) based numerical solvers for NMPC
- model-predictive-control
- nonlinear-model-predictive-control
- mpc
- nmpc