Repository Index

💬 Trace citation chains for any concept across research papers and render them as an interactive graph.

• academic-research
• bibliography
• citation-graph
• cli

Updated infix.cl of the CMU AI repository, originally written by Mark Kantrowitz

• infix-notation
• common-lisp
• mathematics

2D triangulation library. Allows translating lines and polygons (both based on points) to the language of GPUs.

• triangulation
• computational-geometry
• golang

Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.

• alphafold3
• docking
• drug-design
• drug-discovery

A common lisp library that provides a numeric type with optional unit and/or uncertainty for computations with automatic error propagation.

Multidimensional array similar to NumPy and NArray

• matrix
• linear-algebra
• colt
• ruby

NASA/JPL SPICE Toolkit for C – patched for cross-platform compatibility

• astronomy
• astronomical-algorithms
• celestial-mechanics
• nasa

CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer

• cancer
• foundation-model
• single-cell

Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network

A versatile single-cell cross-modality translation method via dual-aligned variational autoencoders

Qurry (was) a prototype for a functional quantum programming language. It incorporated many aspects of functional programming (Haskell, Clojure), but also took standard design philosophies from C++, Python, and other "traditional" languages. [category: quantum]

A pure Crystal Vector Math library

• crystal
• vector
• quaternion

Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics

• bioinformatics
• cell-type-deconvolution
• computational-biology
• deconvolution

Some useful additons for makepkg for archlinux

• archlinux
• bolt
• clang
• gcc

PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarity Augmentation"

Nova DSO Tracker is an open-source Flask application for astrophotographers, providing real-time tracking of deep-sky objects' altitude, observability prediction, and integration with Stellarium and SIMBAD databases.

• astrophotography
• astronomy
• ephem
• flask

ODE system solver made simple. For IVPs (initial value problems).

• runge-kutta-fehlberg
• runge-kutta
• simulation
• ode-solver

An ordinary differential equation solving library in golang.

• ode
• solving-library
• multivariate
• differential-equations

Ruby client for interacting with the NASA (POWER) Agroclimatology Web Resource

• solar-radiation
• nasa
• agriculture
• ruby

Translatedfractional api base on golang . golang math tools fractional molecular denominator fraction calculation numerator denominator operations

• fractional
• molecular
• denominator
• operation

An effort to consolidate the needs and plans of individuals and organizations using Common Lisp to meet their numerical and scientific computing needs.

Coq formalization of algorithms due to Tarjan and Kosaraju for finding strongly connected graph components using Mathematical Components and SSReflect [maintainers=@CohenCyril,@palmskog]

• coq
• mathcomp
• ssreflect
• tarjan-algorithm

Quantum randomness source using the ANU hardware QRNG

• random-number-generators
• quantum-mechanics

chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models