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Repository Index
77,353 visible repositories in the index
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TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524
- self-attention
- compound-protein-interaction
- transformercpi
- structure-free-virtual-sreening
Optimising chemical reactions using machine learning
- chemistry
- machine-learning
- optimization
- bayesian-optimization
Safe Bayesian Optimization
- gaussian-processes
- optimization
- robotics
- reinforcement-learning
Interpretable bilinear attention network with domain adaptation improves drug-target prediction.
The repository host gives no description.
Automated 3D brain registration with support for multiple species and atlases.
- registration
- atlases
- brain
- neuroscience
Accurate and efficient spot detection for microscopy data
⚡ Open-source software for deep learning-based digital pathology
- deep-learning
- machine-learning
- digital-pathology
- computational-pathology
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
- protein
- protein-sequences
- protein-design
- representation-learning
The repository host gives no description.
The repository host gives no description.
Easy link prediction tool
- python
- network-analysis
- link-prediction
- research
A tool for cell instance aware segmentation in densely packed 3D volumetric images
- segmentation
- deep-learning
- bioinformatics
- neural-network
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
- neuroimaging
- reproducibility
- pipeline
- meta-analysis
Auto-QChem is an automated workflow for the generation and storage of DFT calculations for organic molecules.
- cheminformatics
- dft-calculations
- automation
- feature
Swift library like numpy, playgrounds notebook like jupyter.
- swift
- matrix
- linearalgebra
- playgrounds
Inner ear models for Python
- python
- cochlea
- inner-ear
- model
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
GeneCompass
A strongly-typed genetic programming framework for Python
- python
- ipynb
- genetic-programming
- framework
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
code to run sei and obtain sei and sequence class predictions