Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
- cancer-imaging-research
- radiomics
- radiomics-features
- machine-learning
Repository Index
47,133 repositories indexed
25–38 of 38 · Most stars
AI-based pathology predicts origins for cancers of unknown primary - Nature
- histology
- pathology
- wsi-images
- histopathology
Interoperable web-based DICOM slide microscopy viewer and annotation tool
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
- neuroimaging
- reproducibility
- pipeline
- meta-analysis
Integrated pipeline for multiplexed image analysis
- multiplexed-imaging
- python
Fast detection of repackaged Android applications based on the comparison of resource files included into the package.
- android
- android-security
- repackaging-detection
- java
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
- cell-annotation
- multiplexed-imaging
- mpif
Efficient and expressive arrayed vector math library with multi-threading and CUDA support in Common Lisp.
Single-cell fluorescence microscopy data analysis
- microscopy
- fluorescence-microscopy-imaging
mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
- qa
- mri
- neuroimaging
- niqc
scPair: Boosting single cell multimodal analysis by leveraging single cell atlases and implicit feature selection
legacy signal processing leveraging afni, ants, fsl, nipy, robex, and wavelet toolbox - brnfswdktm
- fmri-preprocessing
- fmri
Functions for the input/output and visualization of medical imaging data that follow either the ANALYZE, NIfTI or AFNI formats.
- nifti
- afni
- analyze
a collection of small utlities useful for neuroimaging research
- utilities