Graph-linked unified embedding for single-cell multi-omics data integration
- bioinformatics
- deep-learning
- single-cell
- single-cell-multiomics
Repository Index
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A thin layer of graphic data types
- graphics-library
- vector
- transformations
- matrix
A library designed to ease geographic coordinate format conversions, and determine sun/moon information in C#
- moon
- coordinates
- longitude
- latitude
GraphDTA: Predicting drug-target binding affinity with graph neural networks
Schema and generated objects for biolink data model and upper ontology
- biolink
- monarchinitiative
- gene-ontology
- datamodel
Graph-based molecule modeling toolkit for cheminformatics
- cheminformatics
- molecular-modeling
- chemistry
- toolkit
A gallery of animations in statistics and utilities to create animations
- r
- r-package
- animation
- statistics
Medical LLM agent and MRI segmentation workspace built on PharmaLLM, with LangGraph, vLLM, and BEU-Net.
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
Astrophotography capture and processing
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
Graph and Network algorithms in Julia
Layout algorithms for graphs and trees in pure Julia.
- graph-visualization
An Elixir library for performing 2D and 3D mathematics.
- elixir-lang
- matrices
- vector
- graphics
TypeDB Bio: Biomedical Knowledge Graph
- bioinformatics
- knowledge-graph
- knowledge-base
- drug-discovery
The Configurable Math Library
- vector-math
- expression-template
- cplusplus-11
- graphics
This library generates graph layouts using the TikZ graph layout package.
NeoDTI: Neural integration of neighbor information from a heterogeneous network for discovering new drug-target interactions
- computational-biology
- bioinformatics
- graph-convolution
- deep-learning
Graph data structures with multiple heterogeneous metadata for Graphs.jl.
- graph
- graphs
- metadata
- juliagraphs
Classification and Gradient-based Localization of Chest Radiographs using PyTorch.
- fine-tuning
- vgg16
- resnet18
- densenet121
An Elixir implementation of the CONREC algorithm for topographic or isochrone maps.
- gis
- conrec
- map
- elixir
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
Working with time-dependent networks in Julia
- graph
- evolving-graphs
- julia
- network