PAthological QUpath Obsession - QuPath and Python conversations
- digital-pathology
- qupath
- python
Repository Index
47,133 repositories indexed
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Modular and modern graph-theory algorithms framework in Java
- graph-algorithms
- graph-theory
- java
- algorithms
Collection of mathematical morphology methods and plugins for ImageJ
- image-processing
- image-analysis
- imagej
- fiji
An NLP library for Uralic languages such as Finnish, Skolt Sami, Moksha and so on. Also supporting some non-Uralic languages such as Spanish, French, Arabic, Swedish, Norwegian, Russian and English. LLMs, FSTs and More!
- nlp-library
- uralic-languages
- finnish
- sami
RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
- biological-images
- root
- painter
- segmentation
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
- r
- neuroanatomy-toolbox
- cran
- neuron
A set of protocols for Arithmetic, Statistics and Logical operations
Stream database events from PostgreSQL to Kafka
- postgresql
- events
- stream
- kafka
Predicting Cell Health with Morphological Profiles
- carpenter-lab
- morphological-profiling
- crispr
- cell-painting
Pragmatic, logical and monochrome theme for Neovim.
Template helpers for Session, logical operations and debug
- meteor
- meteor-package
- template
- templating
ESMira is a tool for running longitudinal studies (ESM, AA, EMA, ...) with data collection and communication with participants being completely anonymous.
- esm
- aa
- ema
- mobile
Quanfima (Quantitative Analysis of Fibrous Materials)
- data-analysis
- material-science
- volumetric-data
- morphological-analysis
This is a small UUID library that implements a chronologically sortable UUID.
A flexible Julia toolkit for high-dimensional cellular profiles
- julia
- morphological-analysis
- high-content-screening
[DEPRECATED] A package for storing morphological profiling data.
Topological sort lib,Sorting and pruning of DAG graphs.
- dag
- topological
- topological-sort
- prune