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Tags: Graphics and 3D
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25–34 of 34 · Most stars

Imagej macro to calculate the MTF based on a knife edge measurement

  • imagej-macro
  • electron-microscopy
  • image-analysis
  • x-ray-imaging

A Python package to analyze matrix fiber orientation and intensity around cells as a proxy for cellular forces. Also measures alignment relative to X/Y axes, points and lines, with optional masks, a Python API and browser tools for analysis and group comparisons.

  • imaging
  • microscopy
  • contractility
  • collagen

A very fast micropython jpeg encoder and decoder for the esp32, with precompiled firmware.

DetecDiv provides a comprehensive set of tools to analyze time microscopy images using deep learning methods. The software structure is such that data can be processed either at the command line or using a graphical user-interface. Detecdiv classification models include : image classification and regression, semantic segmentation, LSTM networks to analyze data and image timeseries.

🔬Python package for high-throughput single-cell imaging analysis.

  • microscopy-image-analysis
  • single-cell-analysis

Python library for statistical analysis of mRNA and protein distributions in fluorescent microscopy images