Repository Index

Tools for computational pathology

• machine-learning
• digital-pathology
• computational-pathology
• biomedical-image-processing

The fast Continuous Wavelet Transform (fCWT) is a library for fast calculation of CWT.

• cwt
• matlab
• cpp
• optimization

The TiGL Geometry Library to process aircraft geometries in pre-design.

• opencascade
• aircraft
• c-plus-plus
• geometry

Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".

• imaging
• ai
• cloud-computing
• medical-imaging

TriWild: Robust Triangulation with Curve Constraints

• traingulation
• meshing
• geometry-processing

Allocators, I/O streams, math, geometry, image and audio processing for D

• utility-library
• dlang
• linear-algebra
• computational-geometry

Umbrella package of the 'spatstat' family................

• r
• spatial-analysis
• spatial-data
• spatstat

PyTorch Connectomics: segmentation toolbox for EM connectomics

• computer-vision
• neuroscience
• connectomics
• pytorch

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

• cancer-imaging-research
• radiomics
• radiomics-features
• machine-learning

Optimising chemical reactions using machine learning

• chemistry
• machine-learning
• optimization
• bayesian-optimization

Safe Bayesian Optimization

• gaussian-processes
• optimization
• robotics
• reinforcement-learning

Numpy-like library in swift. (Multi-dimensional Array, ndarray, matrix and vector library)

• swift
• math
• ndimensional-arrays
• ndarray

Astrophotography capture and processing

The Mines Java Toolkit

• geophysics
• scientific-computing
• visualization
• mines-java-toolkit

a simple vector library for Lua based on the PVector class from processing

• lua
• love2d
• vectors
• game-development

Java Scientific Computing Library - Signal Processing, FFT, Filters, PSD, DCT, SciPy-like APIs for JVM & Android used in Machine Learning and Data Science.

• android
• java
• python
• scipy

Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.

• microscopy
• image-processing
• segmentation
• biology

DetecDiv provides a comprehensive set of tools to analyze time microscopy images using deep learning methods. The software structure is such that data can be processed either at the command line or using a graphical user-interface. Detecdiv classification models include : image classification and regression, semantic segmentation, LSTM networks to analyze data and image timeseries.

legacy signal processing leveraging afni, ants, fsl, nipy, robex, and wavelet toolbox - brnfswdktm

• fmri-preprocessing
• fmri