Image restoration for fluorescence microscopy
Repository Index
47,133 repositories indexed
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OpenAeroStruct is a lightweight tool that performs aerostructural optimization using OpenMDAO.
- openmdao
- optimization
- aerodynamics
- open-source
Automated 3D cell detection in very large images
- microscopy
- cell-detection
- deep-learning
- image-analysis
PyTorch Connectomics: segmentation toolbox for EM connectomics
- computer-vision
- neuroscience
- connectomics
- pytorch
Probabilistic cell segmentation for in situ spatial transcriptomics
A Python interface to access neuroanatomical atlases
- neuroscience
- python
- microscopy
- registration
A simple cross platform .NET API for Intel MKL
- mkl
- cross-platform
- matrix
- linear-algebra
Interoperable web-based DICOM slide microscopy viewer and annotation tool
A dataset, API, and parser for USDA plant hardiness zones.
- usda
- api
- plants
- farm
Automated 3D brain registration with support for multiple species and atlases.
- registration
- atlases
- brain
- neuroscience
Accurate and efficient spot detection for microscopy data
Python package for image-based profiling
- cytominer
- microscopy
- morphological-profiling
- python
Motor simulation plugins for Gazebo - ROS
Inner ear models for Python
- python
- cochlea
- inner-ear
- model
Axon/Myelin segmentation using Deep Learning
- deep-learning
- machine-learning
- myelin
- axon
A math library for Haxe.
python functions for simulating optical transfer functions
- microscopy
- numpy
NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.
- r
- neuroanatomy-toolbox
- cran
- neuron
The framework for quantification of neuronal anatomy
- neuroscience
- neuroanatomy-toolbox
- imagej
- imagej2
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
Methods for Image-Based Cell Profiling
A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.
- equation-systems
- mathematical-expression-parser
- mathematical-expressions-evaluator
- determinant-calculation
💬 Trace citation chains for any concept across research papers and render them as an interactive graph.
- academic-research
- bibliography
- citation-graph
- cli