RTree2D is a 2D immutable R-tree for ultra-fast nearest and intersection queries in plane and spherical coordinates
- scala
- rtree
- 2d
- str
Repository Index
47,133 repositories indexed
25–42 of 42 · Most stars
Learning cell communication from spatial graphs of cells
- tensorflow
- gnn
- glm
- cvae
Delphi matrix library
means completeness and balancing, from the Arabic word الجبر
- algebra
- vector
- matrix
- scalar
PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturbations at bulk and single-cell levels.
BulkFormer: A large-scale foundation model for human bulk transcriptomes
Arbitrary Big Integer Library for Pascal
- intx
- biginteger
- pascal
- fpc
Tool for precise, interactive, fast and scalable FISH spot detection
Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
- single-cell
- scrna-seq
- scatac-seq
- deep-neural-networks
MCP server for spatial transcriptomics analysis through natural language interfaces.
- bioinformatics
- cell-communication
- deconvolution
- machine-learning
A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources
- bioimage-analysis
- cell-classification
- computer-vision
- digital-pathology
A metaheuristic optimization framework
- optimization
- optimization-algorithms
- optimization-methods
- genetic-algorithm
Pascal library for arbitrary precision BCD floating point numbers
- pascal
- arbitrary-precision
- math
- bignumber
Arbitrary Precision Library for Delphi with Support for Integer and Floating Point Computations.
Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics
- bioinformatics
- cell-type-deconvolution
- computational-biology
- deconvolution
Data logistics system enabling real-time pathogen surveillance. Built for the Seattle Flu Study.
- postgres
- postgresql
- python
- infectious-disease
C++ modules for scalar, vector and complex math. And maths.
- cpp20
- math
- mathematics
- vectors
Utility library to pretty print physical values in proper metric units
- ada2012
- ada
- utility-library
- formatting-output