The Mines Java Toolkit
- geophysics
- scientific-computing
- visualization
- mines-java-toolkit
Repository Index
47,133 repositories indexed
25–35 of 35 · Most stars
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
Multi-stage Riemannian flow matching for physically valid molecular docking, with GNINA scoring, PoseBusters filtering, CLI inference, and benchmarks.
- alphafold3
- docking
- drug-design
- drug-discovery
Qurry (was) a prototype for a functional quantum programming language. It incorporated many aspects of functional programming (Haskell, Clojure), but also took standard design philosophies from C++, Python, and other "traditional" languages. [category: quantum]
Java Scientific Computing Library - Signal Processing, FFT, Filters, PSD, DCT, SciPy-like APIs for JVM & Android used in Machine Learning and Data Science.
- android
- java
- python
- scipy
UV-first benchmark for protein-ligand docking with reproducible annotation, pocket similarity, and HPC workflows.
- benchmark
- bioinformatics
- cheminformatics
- computational-chemistry
Generative models for transcriptomic-driven or protein-driven molecular design (PaccMann^RL).
- deep-reinforcement-learning
- generative-model
- vae
- molecule-generation
go-glmatrix is a golang version of glMatrix, which is "designed to perform vector and matrix operations stupidly fast".
Winner of the Golem Gitcoin Hackathon 2020 (https://blog.golemproject.net/meet-the-winners-golem-gitcoin-hackathon-2020/). This app lets people design, simulate, and analyse antenna arrays without the need to utilize commercial and expensive applications.
- golem
legacy signal processing leveraging afni, ants, fsl, nipy, robex, and wavelet toolbox - brnfswdktm
- fmri-preprocessing
- fmri
This is a weather app for the MacOSX menubar that the user can easily click to find the weather. Uses CSS based design and gets data from OpenWeatherMap.