Predicting Cell Health with Morphological Profiles
- carpenter-lab
- morphological-profiling
- crispr
- cell-painting
Repository Index
47,133 repositories indexed
25–33 of 33 · Most stars
Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network
Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics
- bioinformatics
- cell-type-deconvolution
- computational-biology
- deconvolution
PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarity Augmentation"
XitoSBML - the spatial SBML plugin for ImageJ
- sbml
- systems-biology
- spatial-sbml-plugin
- imagej
Interpretable modeling of cellular responses to drug perturbations using cycle consistence learning
DeepAEG: A model for predicting cancer drug response based on data enhancement and edge-collaborative update strategies
Interpretable drug response prediction with graph neural networks over drugs, cell lines, and genes.
GNN-based gene-selection deep learning model for drug response prediction