Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
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Tiny header-only C++17 library for lat/lng geometry: distance, bearing, area, point-in-polygon and path proximity
MCP server for spatial transcriptomics analysis through natural language interfaces.
- bioinformatics
- cell-communication
- deconvolution
- machine-learning
Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional graph neural network
DE-9IM spatial predicate library implemented in Javascript.
- de-9im
- spatial
- predicates
- javascript
Fast, deterministic cell-type deconvolution for million-bin spatial transcriptomics
- bioinformatics
- cell-type-deconvolution
- computational-biology
- deconvolution
XitoSBML - the spatial SBML plugin for ImageJ
- sbml
- systems-biology
- spatial-sbml-plugin
- imagej