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Tags: Science and math
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25–48 of 95 · Most stars

Polygonal Surface Reconstruction from Point Clouds (C++ & Python)

  • surface-reconstruction
  • urban-modeling
  • urban-reconstruction
  • primitive-extraction

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

  • deep-learning
  • protein-sequences
  • protein-structure
  • semi-supervised-learning

Robust Tetrahedral Meshing in the Wild.

  • geometry-processing
  • tetrahedral-meshing
  • surface-repair
  • 3d-triangulation

RBDL is a C++ library that contains some essential and efficient rigid body dynamics algorithms such as the Articulated Body Algorithm (ABA) for forward dynamics, Recursive Newton-Euler Algorithm (RNEA) for inverse dynamics, the Composite Rigid Body Algorithm (CRBA) for the efficient computation of the joint space inertia matrix and is also able to compute forward dynamics with external contact constraints and collision impulses. Furthermore it has some basic support for forward and inverse kinematics.

  • articulated-body-algorithm
  • inverse-dynamics
  • forward-dynamics
  • multi-body-dynamics

Nonconvex embedded optimization: code generation for fast real-time optimization + ROS support

  • embedded-optimization
  • nonconvex
  • model-predictive-control
  • rust-library

The Point Processing Toolkit (pptk) is a Python package for visualizing and processing 2-d/3-d point clouds.

A Swift micro library for generating Sunrise and Sunset times on device, requiring no network access.

  • swift
  • sunrise
  • sunset
  • ios

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

  • sequence-alignment
  • edit-distance
  • levehnstein-distance
  • library

Spatial Single Cell Analysis in Python

  • single-cell-rna-seq
  • single-cell-genomics
  • spatial-transcriptomics
  • spatial-analysis

open source software for bidimensional and tridimensional remeshing

  • mesh
  • mesh-adaptation
  • anisotropic-mesh-adaptation
  • isotropic-mesh-adaptation

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

Advanced date, time and interval library for Java with sun/moon-astronomy and calendars like Chinese, Coptic, Ethiopian, French Republican, Hebrew, Hijri, Historic Christian, Indian National, Japanese, Julian, Korean, Minguo, Persian, Thai, Vietnamese

A C++14-compatible physical units library with no dependencies and a single-file delivery option. Emphasis on safety, accessibility, performance, and developer experience.

  • cpp
  • cpp14
  • cpp14-library
  • dimensional-analysis

The fastest automatic differentiation library for C++, with Python bindings. Forward, adjoint and higher-order derivatives, checkpointing, Eigen support and JIT. Reproducible benchmarks against CppAD, Adept and autodiff.

  • automatic-differentiation
  • aad
  • algorithmic-differentiation
  • autodiff

Universal cheminformatics toolkit, utilities and database search tools

A library designed to ease geographic coordinate format conversions, and determine sun/moon information in C#

  • moon
  • coordinates
  • longitude
  • latitude

Pathology Language and Image Pre-Training (PLIP) is the first vision and language foundation model for Pathology AI (Nature Medicine). PLIP is a large-scale pre-trained model that can be used to extract visual and language features from pathology images and text description. The model is a fine-tuned version of the original CLIP model.