Repository Index

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

• cellprofiler-analyst
• cellprofiler
• image-analysis
• machine-learning

TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524

• self-attention
• compound-protein-interaction
• transformercpi
• structure-free-virtual-sreening

FastGenericNew: high-performance generic instantiation for .NET, replacing Activator.CreateInstance<

• activator
• createinstance
• csharp
• csharp-library

Extensive math expression evaluator library for JavaScript and Node.js

• typescript
• interpreter
• javascript
• calculator

The Configurable Math Library

• vector-math
• expression-template
• cplusplus-11
• graphics

Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning with autoencoders

• epigenomics
• pattern-search
• data-visualization
• interactive-machine-learning

Research experiments exploring uncommon quant techniques.

• analysis
• jupyter-notebook
• python
• quant

Run scripts, explore your genome, and get personalized explanations — all in natural dialogue.

• analysis
• claude
• claudecode
• dna

C# math expression library with symbolic computation support

• csharp
• dotnet
• expression-parser
• math

Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.

• minerva
• microscopy
• ome
• immunofluorescence

High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations

SIMD powered simple-math numerical operations on arrays for Common Lisp through CFFI [still experimental]

• lisp
• common-lisp
• scientific-computing
• simd

Efficient and expressive arrayed vector math library with multi-threading and CUDA support in Common Lisp.

A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.

• equation-systems
• mathematical-expression-parser
• mathematical-expressions-evaluator
• determinant-calculation

An Elixir library for parsing and evaluating mathematical expressions

C++ modules for scalar, vector and complex math. And maths.

• cpp20
• math
• mathematics
• vectors

Winner of the Golem Gitcoin Hackathon 2020 (https://blog.golemproject.net/meet-the-winners-golem-gitcoin-hackathon-2020/). This app lets people design, simulate, and analyse antenna arrays without the need to utilize commercial and expensive applications.

• golem