Repository Index

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

• cancer-imaging-research
• radiomics
• radiomics-features
• machine-learning

A micro neural network multilayer perceptron for MicroPython (used on ESP32 and Pycom modules)

• micropython
• neural-network
• multilayer-perceptron
• mlp

PolyTutor overview of Polymarket trading bots: strategy guides (copy trading, market making, dump-hedge, last-seconds, sports), case studies, and engineering notes. Smart trading. Real edge.

• documentation
• polymarket
• polytutor
• prediction-markets

Passive market-making bot for Predict.fun: quotes from live order books, replaces stale orders and cancels on unsafe price/depth; Windows desktop app and web console for Ubuntu servers.

• desktop-app
• market-making
• predict-fun
• prediction-markets

A Network Integration Approach for Drug-Target Interaction Prediction

a solution that can help developers display pictures in any shape.

A Claude Code skill that turns one picture into a 3D object that takes itself apart: built in three.js from code, checked against the picture, filmed at 60 fps with a synced score.

Do stock correlations predict the market? 66 pre-registered tests, the data, and a triple pendulum that explains why not. If you have an idea you want me to try, submit it as a PR and I will test it and get back to you.

Shallow and Deep Convolutional Networks for Saliency Prediction

Predictable JavaScript abstractions for Discord API.

Open-source OSINT intelligence dashboard tracking the Iran conflict in real time — live DeckGL/MapLibre conflict map, 30 bias-labeled feeds, actor dossiers, and daily briefs. Live at conflicts.app.

• deckgl
• geopolitics
• intelligence
• maplibre

AI-based pathology predicts origins for cancers of unknown primary - Nature

• histology
• pathology
• wsi-images
• histopathology

Local-first voice input for macOS and Windows. On-device speech recognition, offline dictation, and local polishing.

An automatic code generator for nonlinear model predictive control (NMPC) and the continuation/GMRES method (C/GMRES) based numerical solvers for NMPC

• model-predictive-control
• nonlinear-model-predictive-control
• mpc
• nmpc

CVPR 2020, "MotionNet: Joint Perception and Motion Prediction for Autonomous Driving Based on Bird's Eye View Maps"

• cvpr2020
• autonomous-driving
• perception
• motion-prediction

Sparse matrix formats for linear algebra supporting scientific and machine learning applications

• go
• golang
• matrix
• scientific-computing

TranslatedPassword generation tool: flexible and scriptable password dictionary generator which can support brute-force, combination, complex rule mode etc...

• password-generator
• password-dictionaries
• wordlist-generator
• brute-force

The Ink language parser and runtime implementation in Lua

• ink
• lua
• narrative
• interactive-fiction

High-performance Piecewise Geometric Model (PGM) learned index implementation in pure Rust with strict epsilon error guarantees

OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.

Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.

• disentanglement
• drug-discovery
• genomics
• perturbation

This repository contains codes for the paper entitled "A CNN-RNN Framework for Crop Yield Prediction"

An addictive Jeopardy! bot for Slack, powered by the jService API. Sets up a perpetual game of Jeopardy! in your Slack channels.

• slack
• heroku
• bot
• ruby

TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524

• self-attention
• compound-protein-interaction
• transformercpi
• structure-free-virtual-sreening