Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome
- cancer-genomics
- cnv-detection
- single-cell
- phylogeny
Repository Index
47,133 repositories indexed
49–72 of 83 · Most stars
Allocators, I/O streams, math, geometry, image and audio processing for D
- utility-library
- dlang
- linear-algebra
- computational-geometry
A formalization of geometry in Coq based on Tarski's axiom system
PyTorch Connectomics: segmentation toolbox for EM connectomics
- computer-vision
- neuroscience
- connectomics
- pytorch
A general library for geometry operations of union, intersections, difference, and xor
- computational-geometry
- union
- intersection
- xor
Practical volume computation and sampling in high dimensions
- geometry
- statistics
- polyhedral-computations
- random-walk
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.
Simple Features is a pure Go Implementation of the OpenGIS Simple Feature Access Specification
A Geometry library for Elixir that calculates spatial relationships between two geometries
- spatial-analysis
- geospatial
- gis
- geometry
A python Two Source Energy Balance model for estimation of evapotranspiration with remote sensing data
- source-energy-balance
- canopy
- soil
- radiometric-temperatures
OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.
Clipping and geometric operations for spherical polygons.
- d3
- map
- polygon-clipping
- projection
Rails frontend to The Genome Institute's drug gene interaction database.
A GDScript port of Delaunator: A fast library for Delaunay triangulation of 2D points.
- computational-geometry
- algorithm
- gdscript
- delaunay
TypeDB Bio: Biomedical Knowledge Graph
- bioinformatics
- knowledge-graph
- knowledge-base
- drug-discovery
BulkFormer: A large-scale foundation model for human bulk transcriptomes
An ActionScript 3 Geometry Library
Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.
Run scripts, explore your genome, and get personalized explanations — all in natural dialogue.
- analysis
- claude
- claudecode
- dna
Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.
- minerva
- microscopy
- ome
- immunofluorescence
Tiny header-only C++17 library for lat/lng geometry: distance, bearing, area, point-in-polygon and path proximity
2d geometry for golang
A powerful library extending VBA with over 100 functions for math, stats, finance, and data manipulation. It supports matrix operations, and user-defined functions, enhancing automation and analysis within Microsoft Office and LibreOffice environments for data management, financial calculations, an more.
- equation-systems
- mathematical-expression-parser
- mathematical-expressions-evaluator
- determinant-calculation
Common Lisp package for simple two dimensional computational geometry.